| Casename | Original diagnosis | Publication | Technique | Affected Cytogenetic Regions | |
|---|---|---|---|---|---|
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01-VIPA | Squamous cell carcinoma [cervix, stage IIa, cell line VIPA] | 12659655 | cCGH |
CGH: ish cgh enh(1p22.3p21.1, 1q23.1q32.3, 2q21.1q32.2, 3p22.3p22.1, 3p12.3q13.2, 3q22.1q25.33, 4q13.1q13.3, 4q22.1q31.3, 5pterp15.2, 5q14.1q23.3, 6p12.3q16.3, 7p15.3p15.1, 7p12.3p12.1, 7q21.11q31.33, 8q21.2q22.3, 9p21.3p13.1, 11p13, 11q14.1q22.3, 12p12.3q12, 13q21.1q31.3, 14q12q13.3, 15q21.1q21.3) dim(1pterp32.1, 2p24.3p24.1, 2q36.1qter, 4pterp15.31, 4q34.1qter, 5q34qter, 6q25.1qter, 7pterp22.1, 7q34qter, 8pterp21.1, 9q33.1qter, 10pterp13, 10q25.1qter, 11q12.1q12.3, 12pterp13.1, 12q22qter, 14q31.1qter, 16p, 16q13qter, 17, 18q22.1q22.3, 19, 20pterp13, 20q, 21, 22) amp(1q31.1q31.3, 3q11.2q13.2, 3q24q25.33, 5p15.2p12, 7q31.1q31.33, 11q21, 12q21.1q21.33)
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02-INBL | Squamous cell carcinoma [cervix, stage IVa, cell line INBL] | 12659655 | cCGH |
CGH: ish cgh enh(1q21.1q41, 3p12.3q26.33, 5p, 6pterp21.31, 6p12.3p12.1, 7p15.3p12.1, 7q21.11q31.33, 11pterp15.1, 11q21, 12q12, 15q22.1q24.3) dim(2q34qter, 4p, 4q31.3qter, 6q24.1qter, 8pterp22, 9q34.11qter, 10pterp15.1, 13q12.11q13.3, 18q12.1qter, 19q13.2qter)
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03-ROVA | Squamous cell carcinoma [cervix, stage Ib, cell line ROVA] | 12659655 | cCGH |
CGH: ish cgh enh(1p31.3p12, 1q22q32.3, 2p15p11.2, 2q21.1q32.3, 3p22.3p12.1, 3q11.2q26.33, 4p15.2q31.3, 5p15.1q31.3, 6p23, 6p12.3q14.3, 6q22.1q22.33, 7p15.3p12.1, 7q21.11q31.33, 8p12, 8q13.1q13.3, 9p23p21.1, 9q21.11q21.33, 11p14.3p14.1, 11q14.1q22.3, 11q24.1qter, 12pterp12.1, 13q14.11q31.3, 14q11.2q31.3, 15q21.1q21.3, 18q12.1q12.3) dim(1pterp34.2, 2q35qter, 3q28qter, 5q35.1qter, 6q26qter, 7pterp22.1, 8pterp23.1, 8q24.21qter, 9q33.1qter, 10q26.11qter, 12pterp13.1, 12q24.11qter, 16p, 16q22.1qter, 17pterp12, 17q23.1qter, 18q23qter, 19, 20q13.11qter, 21q22.11qter, 22) amp(1q22, 3q23q24)
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04-CALO | Squamous cell carcinoma [cervix, stage Ib, cell line CALO] | 12659655 | cCGH |
CGH: ish cgh enh(1p31.3p12, 1q22q32.3, 2p16.3p14, 2q21.1q33.3, 3pterp26.1, 3p22.3p22.1, 3p13q26.33, 4q26q31.23, 5q11.2q23.3, 6p12.3q12, 6q21, 7p21.3p14.1, 7q21.11q31.33, 9p23p13.1, 11q14.1q22.3, 12p11.23q12, 12q15q21.33, 13q21.1q22.3, 18q11.2) dim(1pterp32.1, 2q35qter, 4pterp15.2, 4q33qter, 6q24.1qter, 8pterp22, 8q24.21qter, 9q33.1qter, 11q12.1q12.3, 12pterp13.1, 12q22qter, 13q12.11q12.3, 15q12q13.3, 16p, 16q22.1qter, 17, 18p11.23p11.21, 19, 20, 21q, 22) amp(3q24q25.33, 5p)
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11801305_ESCC-kam-A-T1 | squamous cell carcinoma [esophagus, submucosa] | 11801305 | cCGH |
CGH: ish cgh enh(1q, 2, 3q, 5q, 6, 7, 8q, 9p, 9q, 10, 11, 12, 13q, 14q, 15q, 18q, 20p) dim(4p, 5q, 9q, 16q, 21q)
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11801305_ESCC-kam-A-T2 | squamous cell carcinoma [esophagus, muscularis propria] | 11801305 | cCGH |
CGH: ish cgh enh(1q, 2p, 2q, 3, 5p, 6, 7p, 8q, 9q, 11p, 12q, 13q, 18q, 20p) dim(2q, 4p, 6, 8p, 9q, 13q, 16q, 17p, 18p, 20q, 21q)
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11801305_ESCC-kam-A-T3 | squamous cell carcinoma [esophagus, adventitia] | 11801305 | cCGH |
CGH: ish cgh enh(1q, 2q, 3q, 5q, 6, 7p, 8q, 11p, 12q, 13q, 18q, 20p, Xq) dim(2q, 4p, 5q, 6, 7q, 9q, 12q, 16q, 17p, 20q, Xp)
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11801305_ESCC-kam-B-T1 | squamous cell carcinoma [esophagus, mucosa] | 11801305 | cCGH |
CGH: ish cgh enh(1p, 2q, 3q, 4q, 5, 6, 8q, 9p, 12q, Xq) dim(9q, 12q, 17q, 20q, 21q)
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11801305_ESCC-kam-B-T2 | squamous cell carcinoma [esophagus, submucosa] | 11801305 | cCGH |
CGH: ish cgh enh(1q, 2q, 3q, 5, 7q, 8q, 9p, 11p, 14q, Xq) dim(2q, 8p, 9q, 13q, 15q, 16q, 17q, 21q)
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11801305_ESCC-kam-B-T3 | squamous cell carcinoma [esophagus, mucosa] | 11801305 | cCGH |
CGH: ish cgh enh(1p, 2q, 3q, 4q, 5, 6, 8q, 9p, 11, 12q, 13q, 14q, Xq) dim(4p, 6, 9q, 17q, 21q)
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11801305_ESCC-kam-B-T4 | squamous cell carcinoma [esophagus, mucosa] | 11801305 | cCGH |
CGH: ish cgh enh(1, 2q, 3q, 5p, 6, 8q, 11p, 12q, 13q, 14q, 18q, Xq) dim(3p, 5q, 7q, 9q, 12q, 13q, 16q, 17q, 17q, 20q, 21q)
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12939741_VuVa-mic-37 | Squamous cell carcinoma | 12939741 | cCGH |
CGH: ish cgh enh(1pterp36.11, 2p24.3p21, 5pterp15.1, 19q13.11qter) dim(4p15.33p14, 7q31.1qter, 10, 11pterp13, 11q23.1qter)
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12939741_VuVa-mic-39 | Squamous cell carcinoma | 12939741 | cCGH |
CGH: ish cgh enh(8q, 9p, 11pterp12, 20q) dim(8pterp12, 14q31.1qter)
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12939741_VuVa-mic-42 | Squamous cell carcinoma | 12939741 | cCGH |
CGH: ish cgh enh(3q13.11q13.33, 3q23q26.33)
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12939741_VuVa-mic-43 | Squamous cell carcinoma | 12939741 | cCGH |
CGH: ish cgh enh(3q13.11qter, 8q21.11qter, 9q21.11qter)
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12939741_VuVa-mic-44 | Squamous cell carcinoma [moderately differentiated] | 12939741 | cCGH |
CGH: ish cgh enh(1pterp31.1, 1q, 19q13.11qter) dim(4p15.33p13, 11q14.1qter, Xpterp11.21, Xq12q21.33)
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12939741_VuVa-mic-48 | Squamous cell carcinoma | 12939741 | cCGH |
CGH: ish cgh enh(5pterp12, 8q)
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12939741_VuVa-mic-49 | Squamous cell carcinoma [moderately differentiated] | 12939741 | cCGH |
CGH: ish cgh enh(1pterp32.1, 3q, 6p, 9q22.1qter, 14q, 16, 18p, 22q13.1qter, Xq22.1qter) dim(3p25.3p12.1, 7p21.3p15.1, 10pterp12.1, 11q23.1qter, 13q14.11q14.3, 15q15.1qter, 17p, 18q21.1qter)
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17298740_ESCC-wu-01 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(3q27.1q27.3, 5pterp15.1, 7p15.3pcen, 9q21.11q21.33, 11, 17, 20q12, 21q21.1q22.2, Xp21.3p21.1) dim(1p31.3p13.1, 4q35.1qter, 18q21.1qter, Xpterp22.11)
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17298740_ESCC-wu-02 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1p21.3qter, 2q, 3q) dim(1pterp32.1)
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17298740_ESCC-wu-03 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1q, 2q, 19qcenq11)
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17298740_ESCC-wu-04 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(5p, 8q, 11q13.1q13.5, 19, 20q) dim(5q13.1qter, 6q, 8pterp21.1, 9, 18q21.1qter, X)
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17298740_ESCC-wu-05 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(2p16.3p16.1, 2q32.1q32.3, 3q27.1q27.3, 5p, 8q, 11q13.1q13.5, 13q, 15q22.1qter, 17, 21, Xpterp22.11) dim(2pterp25.1, 8p, 15q12q21.3, 18q21.1qter)
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17298740_ESCC-wu-06 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1pterp31.1, 3q, 4p, 9q34.11qter, 12, 13, 15q26.1qter, 17, 18p) dim(Xp)
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17298740_ESCC-wu-07 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1p22.3p21.1, 3q)
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17298740_ESCC-wu-08 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(5, 8q12.1q13.3, 9q, 11q, 14q, 19qcenq12, 20qcenq11.23) dim(4, 22, X)
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17298740_ESCC-wu-09 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1q32.1qter, 2qcenq14.3, 3q27.1q27.3, 6p22.3p21.1, 6q15q22.33, 7q21.11q21.3, 11q13.1q13.5, 14q, 16, 20q12, Xp21.3p21.1) dim(4, 22, X)
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17298740_ESCC-wu-10 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(2, 2, 2p23.3p22.1, 5pterp13.1, 7p15.3p13, 7qcenq11.23, 17, 19, 21q) dim(4, X)
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17298740_ESCC-wu-11 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(3q21.1q27.3, 4p15.33q32.3, 8q12.1q24.13) dim(4, X)
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17298740_ESCC-wu-12 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(3qcenq13.33, 3q24qter, 5q31.1q31.3, 8q, 10q21.1q21.3, 15q21.1qter, 19qcenq12) dim(1p35.3p35.1, 7q31.1qter, 21)
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17298740_ESCC-wu-13 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1q, 3q, 7, 8, 13q) dim(1q32.1q32.3, 4pterp15.1, 9, 10p, Xpterp22.11)
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17298740_ESCC-wu-14 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1p, 3q, 5pterp13.1, 7p21.3p15.1, 9p13.3qter, 11, 13, 17, 18, 19, 20, 21q) dim(19)
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17298740_ESCC-wu-15 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(3q, 13q, 17)
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17298740_ESCC-wu-16 | squamous cell carcinoma [esophagus] | 17298740 | cCGH |
CGH: ish cgh enh(1q22, 3q, 5p, 9)
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19607727_PulmSCC-15 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(5p14.1q11.1, 12p12.3p11.22)
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19607727_PulmSCC-16 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(1q21.1q44, 5p15.33, 5p15.32p13.2, 7p22.3p11.2, 16p13.3, 17q25.3) dim(3p25.2p21.31, 3p14.3p11.1, 8p23.3q21.11, 9p24.3p21.3, 9q12q13, 13q12.11q34, 15q11.2q26.3)
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19607727_PulmSCC-17 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(8q12.2q24.3, 11p11.11q13.1, 18p11.31p11.21)
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19607727_PulmSCC-18 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(4q34.3q35.1, 11q13.1q13.3, 11q13.4, 11q13.5q22.1, 11q22.2q22.3) dim(9p13.1q13)
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19607727_PulmSCC-19 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(1q21.1q22, 5p15.33p12)
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19607727_PulmSCC-20 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(4p15.2p15.1)
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19607727_PulmSCC-21 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(5p15.33p13.1, 7p22.3q22.1, 7q22.2q36.3)
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19607727_PulmSCC-22 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(8q12.3q24.3, 9p13.3p13.2, 16p13.3)
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19607727_PulmSCC-23 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(9p13.3p13.2)
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19607727_PulmSCC-24 | squamous cell carcinoma [lung] | 19607727 | aCGH | |
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19607727_PulmSCC-25 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(1q21.1q25.2, 2p16.1p15, 3q26.2, 3q28q29, 4p15.1, 8q12.3q24.3, 11p14.2p13, 19q12q13.31) dim(2p25.3p24.3, 18q12.1q23)
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19607727_PulmSCC-26 | squamous cell carcinoma [lung] | 19607727 | aCGH | |
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19607727_PulmSCC-27 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(1p31.3p31.1, 2q33.1, 3q24, 3q25.1q26.2, 3q26.31q27.1, 3q29, 4p12, 5p15.33p13.3, 7p11.2, 7q31.31q34, 8q23.3q24.3, 9q22.33q33.1, 14q11.2, 16q22.3q23.1, 17q23.3q25.3, 19q13.33q13.42) dim(4q34.2q35.2, 8p22p12, 8q13.3q22.1, 9p21.3, 10q11.22q21.1, 18q22.3q23)
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19607727_PulmSCC-28 | squamous cell carcinoma [lung] | 19607727 | aCGH | |
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19607727_PulmSCC-29 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(3q11.2q29, 4q12q13.3, 8q11.1q24.3, 14q32.33, 16p13.3) dim(3p26.3p12.2, 4p16.3, 4p16.2q12, 4q13.3q35.2, 5q11.2q33.2, 8p23.3p12, 8p11.23p11.1, 9p24.2p21.1, 9p13.1q13, 9q21.33q22.32, 10q11.21q26.3, 13q12.11q21.31, 17p13.3p11.2)
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19607727_PulmSCC-30 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(6q23.2q23.3, 11q13.1q13.2, 12q13.3q14.2, 12q14.3q15, 20q13.33) dim(8p23.3p23.1)
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19607727_PulmSCC-31 | squamous cell carcinoma [lung] | 19607727 | aCGH |
aCGH: ish cgh enh(1p31.1p12, 1q21.1q44, 7p22.3q11.21, 8q21.13q24.3, 12p13.33q12, 17q21.32q25.3, 19q12q13.32) dim(1p36.33p34.3, 3p22.1p14.1, 4p16.3p14, 8p23.3p23.1, 10q23.1q26.13, 11p15.5p11.11, 11q22.3q25, 13q12.13q12.2, 15q11.2q25.2, 16p13.11, 16p12.3p11.2, 16q23.1q24.3, 17p13.3p11.2, 18q23, 19p13.3p12, 20p13p11.21)
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(caselist truncated at 50 of 1809 cases)